Publications

📖 Publications

Conferences

• [APAO’27] Foundation Model–Based Fusion of Color Fundus Photography and Optical Coherence Tomography for Systemic biomarkers Prediction
  • Yiheng Shi, Guanchen Wu, Siyi Chen, Zengxiang Li, Laura Gutierrez, Yao Jie, Haoran Cheng, Alessandro Berni, Carl Yang, and Daniel Ting
• [BHI’26] MIRAGE: Knowledge Graph-Guided Missing MRI Imputation for Alzheimer’s Disease Prediction
  • Guanchen Wu, Zhe Huang, Yuzhang Xie, Runze Yan, Akul Chopra, Deqiang Qiu, Xiao Hu, Fei Wang, and Carl Yang
• [KDD’26] EHRBench: An Automated and Reliable EHR-based Benchmark for Clinical Decision Making with LLMs
  • Yuzhang Xie, Keqi Han, Yunpeng Xiao, Hejie Cui, Guanchen Wu, Ziyang Zhang, Kai Shu, Jiaying Lu, Xiao Hu, and Carl Yang
• [EMNLP’26] EpiQAL: Benchmarking Large Language Models in Epidemiological Question Answering and Reasoning
  • Mingyang Wei, Dehai Min, Zewen Liu, Yuzhang Xie, Guanchen Wu, Ziyang Zhang, Carl Yang, Max SY Lau, Qi He, Lu Cheng, and Wei Jin
• [BIBM’25] Utilizing Large Language Models for Zero-Shot Medical Ontology Extension from Clinical Notes
  • Guanchen Wu, Yuzhang Xie, Huanmei Wu, Zhe He, Hui Shao, Xiao Hu, and Carl Yang
• [Agents4Science’25] Towards Automatic Evaluation and Selection of PHI De-identification Models via Multi-Agent Collaboration
  • Guanchen Wu, Zuhui Chen, Yuzhang Xie, and Carl Yang
• [MedInfo’25] Large Language Model Empowered Privacy-Protected Framework for PHI Annotation in Clinical Notes
  • Guanchen Wu, Linzhi Zheng, Han Xie, Zhen Xiang, Jiaying Lu, Darren Liu, Delgersuren Bold, Bo Li, Xiao Hu, and Carl Yang
• [ACL’25] GraphNarrator: Generating Textual Explanations for Graph Neural Networks
  • Bo Pan†, Zhen Xiong†, Guanchen Wu†, Zheng Zhang, Yifei Zhang, and Liang Zhao
    † Co-first authors

Journals

• [Frontiers’24] Ontology Extension by Online Clustering With Large Language Model Agents
  • Guanchen Wu, Chen Ling, Ilana Graetz, and Liang Zhao